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A pyrosequencing-based method for high resolution HLA-DRB genotyping

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Author:
No author available
Journal Title:
JOURNAL OF THE FOURTH MILITARY MEDICAL UNIVERSITY
Issue:
18
DOI:
10.3321/j.issn:1000-2790.2005.18.001
Key Word:
多态现象(遗传学);HLA抗原;焦磷酸微测序;基因型;polymorphism(Genetics);HLA antigens;pyrosequencing;genotype

Abstract: AIM:To develop a pyrosequencing-based typing (PSBT) approach for high resolution identification of HLA-DRB alleles. METHODS:The DNA fragments from HLA-DRB exon-2 were obtained using allele-specific or multiplex PCR amplification. The PSBT of purified DNA was performed. RESULTS:The polymorphic residues of HLA-DRB genes were identified in each pyrosequencing reaction and read length up to 90 nucleotides was obtained. A blood sample containing heterozygous alleles (DRB1-0405 and DRB3-01011) was analyzed using purified DNA respectively from allele-specific or multiplex PCR reaction, the results of which were consistent with those from the traditional method. CONCLUSION:Pyrosequencing used in the analysis of HLA-DRB alleles has the advantage of high resolution and can be widely employed clinically in donor/recipient selection.

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